Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Msh4Q99MT2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh4Q99MT2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Msh4Q99MT2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.34■□□□□ 0.69
Msh4Q99MT2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Msh4Q99MT2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh4Q99MT2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Msh4Q99MT2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh4Q99MT2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh4Q99MT2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Msh4Q99MT2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.33■□□□□ 0.68
Msh4Q99MT2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Msh4Q99MT2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Msh4Q99MT2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh4Q99MT2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh4Q99MT2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Msh4Q99MT2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Msh4Q99MT2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.33■□□□□ 0.68
Msh4Q99MT2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh4Q99MT2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh4Q99MT2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh4Q99MT2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh4Q99MT2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.3■□□□□ 0.68
Msh4Q99MT2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh4Q99MT2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh4Q99MT2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh4Q99MT2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.3■□□□□ 0.68
Msh4Q99MT2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Msh4Q99MT2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh4Q99MT2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Gm15039-201ENSMUST00000118914 875 ntBASIC19.28■□□□□ 0.68
Msh4Q99MT2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Msh4Q99MT2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh4Q99MT2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh4Q99MT2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh4Q99MT2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh4Q99MT2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh4Q99MT2 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.27■□□□□ 0.68
Msh4Q99MT2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Msh4Q99MT2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.26■□□□□ 0.67
Msh4Q99MT2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Msh4Q99MT2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Msh4Q99MT2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms