Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf111Q99ML9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf111Q99ML9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf111Q99ML9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf111Q99ML9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf111Q99ML9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.29■□□□□ 0.68
Rnf111Q99ML9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf111Q99ML9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rnf111Q99ML9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf111Q99ML9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf111Q99ML9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf111Q99ML9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf111Q99ML9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf111Q99ML9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.27■□□□□ 0.68
Rnf111Q99ML9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf111Q99ML9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf111Q99ML9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf111Q99ML9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Rps24-207ENSMUST00000224568 714 ntBASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf111Q99ML9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf111Q99ML9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf111Q99ML9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf111Q99ML9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf111Q99ML9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Gm45102-201ENSMUST00000207427 857 ntBASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf111Q99ML9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms