Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.05■□□□□ 0.8
Cttnbp2nlQ99LJ0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cttnbp2nlQ99LJ0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cttnbp2nlQ99LJ0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cttnbp2nlQ99LJ0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cttnbp2nlQ99LJ0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cttnbp2nlQ99LJ0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cttnbp2nlQ99LJ0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.01■□□□□ 0.79
Cttnbp2nlQ99LJ0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cttnbp2nlQ99LJ0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cttnbp2nlQ99LJ0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.98■□□□□ 0.79
Cttnbp2nlQ99LJ0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cttnbp2nlQ99LJ0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cttnbp2nlQ99LJ0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cttnbp2nlQ99LJ0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cttnbp2nlQ99LJ0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cttnbp2nlQ99LJ0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Cttnbp2nlQ99LJ0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cttnbp2nlQ99LJ0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cttnbp2nlQ99LJ0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms