Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smim11aQ99J19 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smim11aQ99J19 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smim11aQ99J19 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smim11aQ99J19 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.47■□□□□ 0.71
Smim11aQ99J19 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smim11aQ99J19 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim11aQ99J19 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim11aQ99J19 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smim11aQ99J19 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim11aQ99J19 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim11aQ99J19 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.44■□□□□ 0.7
Smim11aQ99J19 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim11aQ99J19 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smim11aQ99J19 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smim11aQ99J19 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.43■□□□□ 0.7
Smim11aQ99J19 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smim11aQ99J19 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smim11aQ99J19 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Gm40881-201ENSMUST00000223397 166 ntBASIC19.41■□□□□ 0.7
Smim11aQ99J19 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.41■□□□□ 0.7
Smim11aQ99J19 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms