Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Prdm9Q96EQ9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prdm9Q96EQ9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Prdm9Q96EQ9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm9Q96EQ9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm9Q96EQ9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm9Q96EQ9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm9Q96EQ9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm9Q96EQ9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.59■□□□□ 0.73
Prdm9Q96EQ9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prdm9Q96EQ9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prdm9Q96EQ9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Prdm9Q96EQ9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prdm9Q96EQ9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.58■□□□□ 0.72
Prdm9Q96EQ9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prdm9Q96EQ9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prdm9Q96EQ9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prdm9Q96EQ9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.58■□□□□ 0.72
Prdm9Q96EQ9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms