Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga4Q91XY4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhga4Q91XY4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga4Q91XY4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga4Q91XY4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Gm27454-201ENSMUST00000185090 204 ntBASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga4Q91XY4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga4Q91XY4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga4Q91XY4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga4Q91XY4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga4Q91XY4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhga4Q91XY4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhga4Q91XY4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.44■□□□□ 0.7
Pcdhga4Q91XY4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga4Q91XY4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga4Q91XY4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga4Q91XY4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga4Q91XY4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga4Q91XY4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga4Q91XY4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhga4Q91XY4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga4Q91XY4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga4Q91XY4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga4Q91XY4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga4Q91XY4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga4Q91XY4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga4Q91XY4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhga4Q91XY4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhga4Q91XY4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga4Q91XY4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga4Q91XY4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdhga4Q91XY4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms