Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rab40cQ8VHQ4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab40cQ8VHQ4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Gm7332-201ENSMUST00000118351 454 ntBASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.22■□□□□ 0.19
Rab40cQ8VHQ4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab40cQ8VHQ4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Rab40cQ8VHQ4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab40cQ8VHQ4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
Rab40cQ8VHQ4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab40cQ8VHQ4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40cQ8VHQ4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40cQ8VHQ4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40cQ8VHQ4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab40cQ8VHQ4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Rab40cQ8VHQ4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 206.2 ms