Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rprd1aQ8VDS4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rprd1aQ8VDS4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Rprd1aQ8VDS4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rprd1aQ8VDS4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rprd1aQ8VDS4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Gm6139-201ENSMUST00000079261 882 ntBASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rprd1aQ8VDS4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Gm8493-201ENSMUST00000196881 489 ntBASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rprd1aQ8VDS4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rprd1aQ8VDS4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rprd1aQ8VDS4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rprd1aQ8VDS4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rprd1aQ8VDS4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rprd1aQ8VDS4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Rprd1aQ8VDS4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms