Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Lsm1Q8VC85 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lsm1Q8VC85 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Gm15820-201ENSMUST00000201566 728 ntBASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Gm9870-201ENSMUST00000063874 645 ntBASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsm1Q8VC85 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsm1Q8VC85 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Gm43530-201ENSMUST00000195920 274 ntBASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsm1Q8VC85 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lsm1Q8VC85 Mir6236-201ENSMUST00000184437 123 ntBASIC19.08■□□□□ 0.64
Lsm1Q8VC85 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lsm1Q8VC85 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
Lsm1Q8VC85 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lsm1Q8VC85 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lsm1Q8VC85 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Lsm1Q8VC85 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Gm5812-201ENSMUST00000061073 957 ntBASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lsm1Q8VC85 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lsm1Q8VC85 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.05■□□□□ 0.64
Lsm1Q8VC85 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lsm1Q8VC85 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm1Q8VC85 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.03■□□□□ 0.64
Lsm1Q8VC85 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.03■□□□□ 0.64
Lsm1Q8VC85 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lsm1Q8VC85 Gm7417-201ENSMUST00000192950 473 ntBASIC19.03■□□□□ 0.64
Lsm1Q8VC85 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lsm1Q8VC85 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms