Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nudcd3Q8R1N4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nudcd3Q8R1N4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nudcd3Q8R1N4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nudcd3Q8R1N4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nudcd3Q8R1N4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.86■□□□□ 0.77
Nudcd3Q8R1N4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.86■□□□□ 0.77
Nudcd3Q8R1N4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nudcd3Q8R1N4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nudcd3Q8R1N4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Nudcd3Q8R1N4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nudcd3Q8R1N4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nudcd3Q8R1N4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nudcd3Q8R1N4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nudcd3Q8R1N4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.83■□□□□ 0.77
Nudcd3Q8R1N4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nudcd3Q8R1N4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Nudcd3Q8R1N4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.83■□□□□ 0.76
Nudcd3Q8R1N4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nudcd3Q8R1N4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nudcd3Q8R1N4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nudcd3Q8R1N4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nudcd3Q8R1N4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nudcd3Q8R1N4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Nudcd3Q8R1N4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nudcd3Q8R1N4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nudcd3Q8R1N4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nudcd3Q8R1N4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nudcd3Q8R1N4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nudcd3Q8R1N4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms