Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tram1l1Q8QZR0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tram1l1Q8QZR0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Tram1l1Q8QZR0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tram1l1Q8QZR0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tram1l1Q8QZR0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Tram1l1Q8QZR0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Tram1l1Q8QZR0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Tram1l1Q8QZR0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Tram1l1Q8QZR0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tram1l1Q8QZR0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tram1l1Q8QZR0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tram1l1Q8QZR0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Gm26571-201ENSMUST00000181399 666 ntBASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Gm42569-201ENSMUST00000200539 472 ntBASIC20■□□□□ 0.79
Tram1l1Q8QZR0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tram1l1Q8QZR0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tram1l1Q8QZR0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Gm7291-201ENSMUST00000199147 382 ntBASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tram1l1Q8QZR0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Gm18671-201ENSMUST00000214826 683 ntBASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tram1l1Q8QZR0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Tram1l1Q8QZR0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Tram1l1Q8QZR0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tram1l1Q8QZR0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tram1l1Q8QZR0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms