Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Sf3a1Q8K4Z5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Sf3a1Q8K4Z5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sf3a1Q8K4Z5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sf3a1Q8K4Z5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC24.35■■□□□ 1.49
Sf3a1Q8K4Z5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Sf3a1Q8K4Z5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sf3a1Q8K4Z5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sf3a1Q8K4Z5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sf3a1Q8K4Z5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Sf3a1Q8K4Z5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Sf3a1Q8K4Z5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.33■■□□□ 1.49
Sf3a1Q8K4Z5 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.33■■□□□ 1.49
Sf3a1Q8K4Z5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Sf3a1Q8K4Z5 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.33■■□□□ 1.49
Sf3a1Q8K4Z5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
Sf3a1Q8K4Z5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Sf3a1Q8K4Z5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
Sf3a1Q8K4Z5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sf3a1Q8K4Z5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sf3a1Q8K4Z5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sf3a1Q8K4Z5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Sf3a1Q8K4Z5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sf3a1Q8K4Z5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sf3a1Q8K4Z5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.3■■□□□ 1.48
Sf3a1Q8K4Z5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sf3a1Q8K4Z5 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.3■■□□□ 1.48
Sf3a1Q8K4Z5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sf3a1Q8K4Z5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC24.29■■□□□ 1.48
Sf3a1Q8K4Z5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Gm45417-201ENSMUST00000209533 758 ntBASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Notumos-201ENSMUST00000151998 2659 ntBASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sf3a1Q8K4Z5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sf3a1Q8K4Z5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sf3a1Q8K4Z5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sf3a1Q8K4Z5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms