Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl47Q8K2Y7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Mrpl47Q8K2Y7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mrpl47Q8K2Y7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.71■□□□□ 0.75
Mrpl47Q8K2Y7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl47Q8K2Y7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mrpl47Q8K2Y7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl47Q8K2Y7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Mrpl47Q8K2Y7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl47Q8K2Y7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl47Q8K2Y7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl47Q8K2Y7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl47Q8K2Y7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Mrpl47Q8K2Y7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mrpl47Q8K2Y7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Iqck-206ENSMUST00000208658 2891 ntBASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.68■□□□□ 0.74
Mrpl47Q8K2Y7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mrpl47Q8K2Y7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mrpl47Q8K2Y7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl47Q8K2Y7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Mrpl47Q8K2Y7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms