Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim5Q8CI51 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim5Q8CI51 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim5Q8CI51 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim5Q8CI51 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim5Q8CI51 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim5Q8CI51 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim5Q8CI51 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim5Q8CI51 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim5Q8CI51 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim5Q8CI51 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pdlim5Q8CI51 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim5Q8CI51 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Pdlim5Q8CI51 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim5Q8CI51 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim5Q8CI51 Etf1-202ENSMUST00000180351 108 ntBASIC18.31■□□□□ 0.52
Pdlim5Q8CI51 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim5Q8CI51 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim5Q8CI51 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim5Q8CI51 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim5Q8CI51 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim5Q8CI51 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Gm43530-201ENSMUST00000195920 274 ntBASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.28■□□□□ 0.52
Pdlim5Q8CI51 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim5Q8CI51 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim5Q8CI51 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim5Q8CI51 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pdlim5Q8CI51 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pdlim5Q8CI51 Gm9959-201ENSMUST00000068277 390 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms