Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.94■■□□□ 1.1
Sox30Q8CGW4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox30Q8CGW4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox30Q8CGW4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sox30Q8CGW4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox30Q8CGW4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox30Q8CGW4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox30Q8CGW4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox30Q8CGW4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox30Q8CGW4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
Sox30Q8CGW4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox30Q8CGW4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox30Q8CGW4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox30Q8CGW4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Gm40881-201ENSMUST00000223397 166 ntBASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox30Q8CGW4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sox30Q8CGW4 Gm43530-201ENSMUST00000195920 274 ntBASIC21.9■■□□□ 1.1
Sox30Q8CGW4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sox30Q8CGW4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox30Q8CGW4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox30Q8CGW4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.89■■□□□ 1.09
Sox30Q8CGW4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox30Q8CGW4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox30Q8CGW4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox30Q8CGW4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Sox30Q8CGW4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox30Q8CGW4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox30Q8CGW4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sox30Q8CGW4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Sox30Q8CGW4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Sox30Q8CGW4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Sox30Q8CGW4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sox30Q8CGW4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Sox30Q8CGW4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Sox30Q8CGW4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Sox30Q8CGW4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sox30Q8CGW4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Sox30Q8CGW4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Sox30Q8CGW4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Sox30Q8CGW4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sox30Q8CGW4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms