Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rdh1Q8CGV4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rdh1Q8CGV4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rdh1Q8CGV4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Rdh1Q8CGV4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rdh1Q8CGV4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rdh1Q8CGV4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rdh1Q8CGV4 Gm11421-201ENSMUST00000122124 294 ntBASIC19.39■□□□□ 0.69
Rdh1Q8CGV4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rdh1Q8CGV4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Rdh1Q8CGV4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Rdh1Q8CGV4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Gm5874-201ENSMUST00000096101 508 ntBASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rdh1Q8CGV4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rdh1Q8CGV4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rdh1Q8CGV4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Rdh1Q8CGV4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rdh1Q8CGV4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rdh1Q8CGV4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rdh1Q8CGV4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rdh1Q8CGV4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms