Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rnf170Q8CBG9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.82■□□□□ 0.28
Rnf170Q8CBG9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf170Q8CBG9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf170Q8CBG9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf170Q8CBG9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf170Q8CBG9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf170Q8CBG9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf170Q8CBG9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rnf170Q8CBG9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf170Q8CBG9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf170Q8CBG9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rnf170Q8CBG9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf170Q8CBG9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf170Q8CBG9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf170Q8CBG9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf170Q8CBG9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms