Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.42■□□□□ 0.7
Cfap54Q8C6S9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Mir5133-201ENSMUST00000174955 77 ntBASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap54Q8C6S9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.4■□□□□ 0.7
Cfap54Q8C6S9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap54Q8C6S9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap54Q8C6S9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap54Q8C6S9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap54Q8C6S9 Gm20760-201ENSMUST00000179197 648 ntBASIC19.4■□□□□ 0.7
Cfap54Q8C6S9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cfap54Q8C6S9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfap54Q8C6S9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfap54Q8C6S9 Gm7977-201ENSMUST00000193787 748 ntBASIC19.36■□□□□ 0.69
Cfap54Q8C6S9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.36■□□□□ 0.69
Cfap54Q8C6S9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap54Q8C6S9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap54Q8C6S9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap54Q8C6S9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.35■□□□□ 0.69
Cfap54Q8C6S9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap54Q8C6S9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap54Q8C6S9 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.35■□□□□ 0.69
Cfap54Q8C6S9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cfap54Q8C6S9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.33■□□□□ 0.69
Cfap54Q8C6S9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap54Q8C6S9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap54Q8C6S9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Cfap54Q8C6S9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap54Q8C6S9 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap54Q8C6S9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.31■□□□□ 0.68
Cfap54Q8C6S9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.31■□□□□ 0.68
Cfap54Q8C6S9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap54Q8C6S9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.31■□□□□ 0.68
Cfap54Q8C6S9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
Cfap54Q8C6S9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap54Q8C6S9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap54Q8C6S9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms