Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Gm9988-201ENSMUST00000069786 435 ntBASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ptcd1Q8C2E4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC24.61■■□□□ 1.53
Ptcd1Q8C2E4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ptcd1Q8C2E4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ptcd1Q8C2E4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ptcd1Q8C2E4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ptcd1Q8C2E4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.58■■□□□ 1.52
Ptcd1Q8C2E4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ptcd1Q8C2E4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ptcd1Q8C2E4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ptcd1Q8C2E4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ptcd1Q8C2E4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ptcd1Q8C2E4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 Nespas-201ENSMUST00000143738 1083 ntBASIC24.54■■□□□ 1.52
Ptcd1Q8C2E4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Ptcd1Q8C2E4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptcd1Q8C2E4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptcd1Q8C2E4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptcd1Q8C2E4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms