Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tsen54Q8C2A2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tsen54Q8C2A2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tsen54Q8C2A2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Gm45444-201ENSMUST00000211394 898 ntBASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tsen54Q8C2A2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tsen54Q8C2A2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Tsen54Q8C2A2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tsen54Q8C2A2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.52■□□□□ 0.23
Tsen54Q8C2A2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Tsen54Q8C2A2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.51■□□□□ 0.23
Tsen54Q8C2A2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tsen54Q8C2A2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.49■□□□□ 0.23
Tsen54Q8C2A2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms