Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Cps1Q8C196 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Cps1Q8C196 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Cps1Q8C196 CT010467.1-202ENSMUST00000205406 714 ntBASIC27.42■■□□□ 1.98
Cps1Q8C196 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Cps1Q8C196 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Cps1Q8C196 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Cps1Q8C196 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC27.42■■□□□ 1.98
Cps1Q8C196 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Cps1Q8C196 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cps1Q8C196 Gm13146-201ENSMUST00000118508 780 ntBASIC27.41■■□□□ 1.98
Cps1Q8C196 Gm13148-201ENSMUST00000118892 745 ntBASIC27.41■■□□□ 1.98
Cps1Q8C196 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Cps1Q8C196 AC122428.2-201ENSMUST00000216321 1832 ntBASIC27.41■■□□□ 1.98
Cps1Q8C196 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cps1Q8C196 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC27.41■■□□□ 1.98
Cps1Q8C196 Mir5133-201ENSMUST00000174955 77 ntBASIC27.41■■□□□ 1.98
Cps1Q8C196 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC27.41■■□□□ 1.98
Cps1Q8C196 Gm4968-201ENSMUST00000071458 858 ntBASIC27.41■■□□□ 1.98
Cps1Q8C196 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
Cps1Q8C196 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC27.4■■□□□ 1.98
Cps1Q8C196 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cps1Q8C196 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cps1Q8C196 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC27.39■■□□□ 1.98
Cps1Q8C196 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Cps1Q8C196 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Cps1Q8C196 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Cps1Q8C196 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC27.38■■□□□ 1.97
Cps1Q8C196 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC27.37■■□□□ 1.97
Cps1Q8C196 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cps1Q8C196 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Cps1Q8C196 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cps1Q8C196 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cps1Q8C196 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC27.36■■□□□ 1.97
Cps1Q8C196 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC27.36■■□□□ 1.97
Cps1Q8C196 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cps1Q8C196 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC27.36■■□□□ 1.97
Cps1Q8C196 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Cps1Q8C196 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
Cps1Q8C196 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Cps1Q8C196 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cps1Q8C196 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Cps1Q8C196 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Cps1Q8C196 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Cps1Q8C196 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cps1Q8C196 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Cps1Q8C196 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cps1Q8C196 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cps1Q8C196 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cps1Q8C196 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC27.34■■□□□ 1.97
Cps1Q8C196 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC27.34■■□□□ 1.97
Cps1Q8C196 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Cps1Q8C196 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cps1Q8C196 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cps1Q8C196 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cps1Q8C196 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cps1Q8C196 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cps1Q8C196 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cps1Q8C196 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC27.32■■□□□ 1.96
Cps1Q8C196 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cps1Q8C196 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC27.32■■□□□ 1.96
Cps1Q8C196 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Cps1Q8C196 Gm43859-201ENSMUST00000200075 1412 ntBASIC27.32■■□□□ 1.96
Cps1Q8C196 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cps1Q8C196 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cps1Q8C196 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC27.31■■□□□ 1.96
Cps1Q8C196 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cps1Q8C196 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cps1Q8C196 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cps1Q8C196 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cps1Q8C196 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cps1Q8C196 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cps1Q8C196 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cps1Q8C196 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cps1Q8C196 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cps1Q8C196 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cps1Q8C196 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cps1Q8C196 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cps1Q8C196 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Cps1Q8C196 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Cps1Q8C196 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Cps1Q8C196 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Cps1Q8C196 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Cps1Q8C196 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC27.28■■□□□ 1.96
Cps1Q8C196 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cps1Q8C196 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cps1Q8C196 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cps1Q8C196 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cps1Q8C196 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cps1Q8C196 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cps1Q8C196 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Cps1Q8C196 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms