Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Gm45102-201ENSMUST00000207427 857 ntBASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps9d1Q8C190 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Gm14117-201ENSMUST00000122417 843 ntBASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps9d1Q8C190 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.55■□□□□ 0.56
Vps9d1Q8C190 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Gm10399-202ENSMUST00000202768 748 ntBASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps9d1Q8C190 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Gm9959-201ENSMUST00000068277 390 ntBASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps9d1Q8C190 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps9d1Q8C190 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Vps9d1Q8C190 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Vps9d1Q8C190 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps9d1Q8C190 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps9d1Q8C190 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps9d1Q8C190 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps9d1Q8C190 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps9d1Q8C190 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps9d1Q8C190 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps9d1Q8C190 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms