Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lrtm1Q8BXQ3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lrtm1Q8BXQ3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lrtm1Q8BXQ3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Mir6236-201ENSMUST00000184437 123 ntBASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Gm45417-201ENSMUST00000209533 758 ntBASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lrtm1Q8BXQ3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Lrtm1Q8BXQ3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lrtm1Q8BXQ3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Lrtm1Q8BXQ3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrtm1Q8BXQ3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Gm12251-201ENSMUST00000117893 792 ntBASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrtm1Q8BXQ3 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.37■□□□□ 0.37
Lrtm1Q8BXQ3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lrtm1Q8BXQ3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrtm1Q8BXQ3 Notumos-201ENSMUST00000151998 2659 ntBASIC17.37■□□□□ 0.37
Lrtm1Q8BXQ3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lrtm1Q8BXQ3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Gm12821-201ENSMUST00000120022 600 ntBASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Lrtm1Q8BXQ3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrtm1Q8BXQ3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrtm1Q8BXQ3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.34■□□□□ 0.37
Lrtm1Q8BXQ3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms