Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpne3Q8BT60 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpne3Q8BT60 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpne3Q8BT60 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cpne3Q8BT60 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Cpne3Q8BT60 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpne3Q8BT60 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpne3Q8BT60 Gm5812-201ENSMUST00000061073 957 ntBASIC19.14■□□□□ 0.65
Cpne3Q8BT60 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpne3Q8BT60 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cpne3Q8BT60 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpne3Q8BT60 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpne3Q8BT60 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Gm15546-201ENSMUST00000122095 826 ntBASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.11■□□□□ 0.65
Cpne3Q8BT60 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpne3Q8BT60 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Gm7417-201ENSMUST00000192950 473 ntBASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpne3Q8BT60 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms