Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn3bQ8BHK2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn3bQ8BHK2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn3bQ8BHK2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn3bQ8BHK2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn3bQ8BHK2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Scn3bQ8BHK2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Scn3bQ8BHK2 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.48■□□□□ 0.55
Scn3bQ8BHK2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn3bQ8BHK2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn3bQ8BHK2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Scn3bQ8BHK2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.45■□□□□ 0.54
Scn3bQ8BHK2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn3bQ8BHK2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn3bQ8BHK2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn3bQ8BHK2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms