Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk3bQ80YF6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bQ80YF6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Gm10399-202ENSMUST00000202768 748 ntBASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bQ80YF6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bQ80YF6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bQ80YF6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bQ80YF6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bQ80YF6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bQ80YF6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bQ80YF6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Upk3bQ80YF6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk3bQ80YF6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Upk3bQ80YF6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upk3bQ80YF6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Upk3bQ80YF6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upk3bQ80YF6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms