Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf168Q80XJ2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf168Q80XJ2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.2■□□□□ 0.98
Rnf168Q80XJ2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf168Q80XJ2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf168Q80XJ2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf168Q80XJ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf168Q80XJ2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf168Q80XJ2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf168Q80XJ2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf168Q80XJ2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf168Q80XJ2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf168Q80XJ2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf168Q80XJ2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rnf168Q80XJ2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf168Q80XJ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf168Q80XJ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf168Q80XJ2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf168Q80XJ2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf168Q80XJ2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf168Q80XJ2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf168Q80XJ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf168Q80XJ2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.14■□□□□ 0.98
Rnf168Q80XJ2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Gm40848-201ENSMUST00000221998 324 ntBASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Gm10493-201ENSMUST00000097270 612 ntBASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rnf168Q80XJ2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Smad6-203ENSMUST00000179458 273 ntBASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rnf168Q80XJ2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf168Q80XJ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rnf168Q80XJ2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf168Q80XJ2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms