Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx4Q7TNK1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx4Q7TNK1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx4Q7TNK1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx4Q7TNK1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx4Q7TNK1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rfx4Q7TNK1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rfx4Q7TNK1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx4Q7TNK1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rfx4Q7TNK1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rfx4Q7TNK1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx4Q7TNK1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rfx4Q7TNK1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx4Q7TNK1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rfx4Q7TNK1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx4Q7TNK1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx4Q7TNK1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx4Q7TNK1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Gm11175-201ENSMUST00000116172 543 ntBASIC19■□□□□ 0.63
Rfx4Q7TNK1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx4Q7TNK1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx4Q7TNK1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx4Q7TNK1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx4Q7TNK1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx4Q7TNK1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.98■□□□□ 0.63
Rfx4Q7TNK1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx4Q7TNK1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms