Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Mir6236-201ENSMUST00000184437 123 ntBASIC19.4■□□□□ 0.7
Scn4bQ7M729 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.4■□□□□ 0.7
Scn4bQ7M729 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Notumos-201ENSMUST00000151998 2659 ntBASIC19.4■□□□□ 0.7
Scn4bQ7M729 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn4bQ7M729 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn4bQ7M729 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Scn4bQ7M729 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
Scn4bQ7M729 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn4bQ7M729 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn4bQ7M729 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.38■□□□□ 0.69
Scn4bQ7M729 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scn4bQ7M729 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn4bQ7M729 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Scn4bQ7M729 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.35■□□□□ 0.69
Scn4bQ7M729 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn4bQ7M729 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn4bQ7M729 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Scn4bQ7M729 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn4bQ7M729 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.33■□□□□ 0.69
Scn4bQ7M729 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.33■□□□□ 0.69
Scn4bQ7M729 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.33■□□□□ 0.68
Scn4bQ7M729 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn4bQ7M729 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn4bQ7M729 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn4bQ7M729 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Gm12922-201ENSMUST00000120626 809 ntBASIC19.32■□□□□ 0.68
Scn4bQ7M729 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn4bQ7M729 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Scn4bQ7M729 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn4bQ7M729 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.31■□□□□ 0.68
Scn4bQ7M729 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms