Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Npc1l1Q6T3U4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Npc1l1Q6T3U4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Npc1l1Q6T3U4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Npc1l1Q6T3U4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.03■■□□□ 1.44
Npc1l1Q6T3U4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Npc1l1Q6T3U4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Gm26571-201ENSMUST00000181399 666 ntBASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Npc1l1Q6T3U4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Gm7291-201ENSMUST00000199147 382 ntBASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Npc1l1Q6T3U4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Gm43060-201ENSMUST00000200621 289 ntBASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Npc1l1Q6T3U4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Npc1l1Q6T3U4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Npc1l1Q6T3U4 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.98■■□□□ 1.43
Npc1l1Q6T3U4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Gm40848-201ENSMUST00000221998 324 ntBASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Gm10493-201ENSMUST00000097270 612 ntBASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Npc1l1Q6T3U4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Npc1l1Q6T3U4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Npc1l1Q6T3U4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.96■■□□□ 1.43
Npc1l1Q6T3U4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Npc1l1Q6T3U4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.95■■□□□ 1.43
Npc1l1Q6T3U4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Npc1l1Q6T3U4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Npc1l1Q6T3U4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC23.95■■□□□ 1.42
Npc1l1Q6T3U4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.95■■□□□ 1.42
Npc1l1Q6T3U4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Npc1l1Q6T3U4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
Npc1l1Q6T3U4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Npc1l1Q6T3U4 Smad6-203ENSMUST00000179458 273 ntBASIC23.94■■□□□ 1.42
Npc1l1Q6T3U4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC23.94■■□□□ 1.42
Npc1l1Q6T3U4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Npc1l1Q6T3U4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Gm42569-201ENSMUST00000200539 472 ntBASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Npc1l1Q6T3U4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Npc1l1Q6T3U4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.91■■□□□ 1.42
Npc1l1Q6T3U4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.91■■□□□ 1.42
Npc1l1Q6T3U4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Npc1l1Q6T3U4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Npc1l1Q6T3U4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Npc1l1Q6T3U4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Npc1l1Q6T3U4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Npc1l1Q6T3U4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms