Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hmgb4Q6P8W9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Spcs1-204ENSMUST00000226782 949 ntBASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgb4Q6P8W9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgb4Q6P8W9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Gm26833-201ENSMUST00000180899 440 ntBASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hmgb4Q6P8W9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgb4Q6P8W9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgb4Q6P8W9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgb4Q6P8W9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Hmgb4Q6P8W9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgb4Q6P8W9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgb4Q6P8W9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgb4Q6P8W9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hmgb4Q6P8W9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.75■□□□□ 0.91
Hmgb4Q6P8W9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
Hmgb4Q6P8W9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgb4Q6P8W9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgb4Q6P8W9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgb4Q6P8W9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgb4Q6P8W9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgb4Q6P8W9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Gm43060-201ENSMUST00000200621 289 ntBASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.72■□□□□ 0.91
Hmgb4Q6P8W9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.71■□□□□ 0.91
Hmgb4Q6P8W9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgb4Q6P8W9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgb4Q6P8W9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgb4Q6P8W9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms