Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Commd3Q63829 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.59■□□□□ 0.25
Commd3Q63829 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Commd3Q63829 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Commd3Q63829 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.58■□□□□ 0.25
Commd3Q63829 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Commd3Q63829 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Commd3Q63829 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.58■□□□□ 0.24
Commd3Q63829 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Commd3Q63829 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Commd3Q63829 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Commd3Q63829 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Commd3Q63829 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Commd3Q63829 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.57■□□□□ 0.24
Commd3Q63829 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.57■□□□□ 0.24
Commd3Q63829 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.57■□□□□ 0.24
Commd3Q63829 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Commd3Q63829 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Commd3Q63829 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Commd3Q63829 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Commd3Q63829 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Commd3Q63829 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Commd3Q63829 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.56■□□□□ 0.24
Commd3Q63829 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Commd3Q63829 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Commd3Q63829 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Commd3Q63829 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Commd3Q63829 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Commd3Q63829 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Commd3Q63829 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Gm16437-201ENSMUST00000025669 507 ntBASIC16.54■□□□□ 0.24
Commd3Q63829 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Commd3Q63829 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Commd3Q63829 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Commd3Q63829 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
Commd3Q63829 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Scarna2-201ENSMUST00000157560 414 ntBASIC16.53■□□□□ 0.24
Commd3Q63829 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Commd3Q63829 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Commd3Q63829 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Commd3Q63829 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Commd3Q63829 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Commd3Q63829 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Commd3Q63829 Gm9806-201ENSMUST00000051080 552 ntBASIC16.52■□□□□ 0.24
Commd3Q63829 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Commd3Q63829 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Commd3Q63829 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Commd3Q63829 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Commd3Q63829 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Commd3Q63829 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Commd3Q63829 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Commd3Q63829 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.51■□□□□ 0.23
Commd3Q63829 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Commd3Q63829 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms