Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.96■□□□□ 0.95
Trim21Q62191 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim21Q62191 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trim21Q62191 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim21Q62191 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim21Q62191 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim21Q62191 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trim21Q62191 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim21Q62191 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim21Q62191 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trim21Q62191 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim21Q62191 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim21Q62191 Gm9870-201ENSMUST00000063874 645 ntBASIC20.93■□□□□ 0.94
Trim21Q62191 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.93■□□□□ 0.94
Trim21Q62191 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim21Q62191 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim21Q62191 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim21Q62191 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim21Q62191 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.92■□□□□ 0.94
Trim21Q62191 Etf1-202ENSMUST00000180351 108 ntBASIC20.92■□□□□ 0.94
Trim21Q62191 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Trim21Q62191 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim21Q62191 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim21Q62191 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim21Q62191 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim21Q62191 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Trim21Q62191 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Trim21Q62191 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim21Q62191 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim21Q62191 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim21Q62191 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim21Q62191 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trim21Q62191 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim21Q62191 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim21Q62191 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim21Q62191 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim21Q62191 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
Trim21Q62191 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim21Q62191 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim21Q62191 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim21Q62191 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim21Q62191 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim21Q62191 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim21Q62191 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim21Q62191 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim21Q62191 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim21Q62191 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim21Q62191 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim21Q62191 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim21Q62191 Golph3-202ENSMUST00000226517 2359 ntBASIC20.88■□□□□ 0.93
Trim21Q62191 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim21Q62191 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim21Q62191 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim21Q62191 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim21Q62191 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim21Q62191 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim21Q62191 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim21Q62191 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.87■□□□□ 0.93
Trim21Q62191 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim21Q62191 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim21Q62191 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms