Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Hcfc1Q61191 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcfc1Q61191 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hcfc1Q61191 Mir5133-201ENSMUST00000174955 77 ntBASIC16.98■□□□□ 0.31
Hcfc1Q61191 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcfc1Q61191 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcfc1Q61191 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hcfc1Q61191 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.97■□□□□ 0.31
Hcfc1Q61191 Gm10653-202ENSMUST00000139570 835 ntBASIC16.97■□□□□ 0.31
Hcfc1Q61191 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcfc1Q61191 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcfc1Q61191 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hcfc1Q61191 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hcfc1Q61191 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hcfc1Q61191 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hcfc1Q61191 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hcfc1Q61191 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hcfc1Q61191 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.96■□□□□ 0.3
Hcfc1Q61191 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hcfc1Q61191 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcfc1Q61191 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcfc1Q61191 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hcfc1Q61191 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.92■□□□□ 0.3
Hcfc1Q61191 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.92■□□□□ 0.3
Hcfc1Q61191 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcfc1Q61191 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.91■□□□□ 0.3
Hcfc1Q61191 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcfc1Q61191 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcfc1Q61191 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcfc1Q61191 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcfc1Q61191 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcfc1Q61191 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Hcfc1Q61191 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hcfc1Q61191 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hcfc1Q61191 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hcfc1Q61191 Gm13146-201ENSMUST00000118508 780 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms