Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Foxf1Q61080 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxf1Q61080 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.66■□□□□ 0.26
Foxf1Q61080 Gm43530-201ENSMUST00000195920 274 ntBASIC16.66■□□□□ 0.26
Foxf1Q61080 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.66■□□□□ 0.26
Foxf1Q61080 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.66■□□□□ 0.26
Foxf1Q61080 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Foxf1Q61080 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.65■□□□□ 0.26
Foxf1Q61080 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.65■□□□□ 0.26
Foxf1Q61080 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.65■□□□□ 0.26
Foxf1Q61080 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Foxf1Q61080 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
Foxf1Q61080 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxf1Q61080 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Foxf1Q61080 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Foxf1Q61080 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.64■□□□□ 0.25
Foxf1Q61080 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.64■□□□□ 0.25
Foxf1Q61080 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Foxf1Q61080 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxf1Q61080 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Foxf1Q61080 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxf1Q61080 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Foxf1Q61080 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.63■□□□□ 0.25
Foxf1Q61080 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Foxf1Q61080 Gm12922-201ENSMUST00000120626 809 ntBASIC16.63■□□□□ 0.25
Foxf1Q61080 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.63■□□□□ 0.25
Foxf1Q61080 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxf1Q61080 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Foxf1Q61080 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Foxf1Q61080 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.62■□□□□ 0.25
Foxf1Q61080 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.62■□□□□ 0.25
Foxf1Q61080 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxf1Q61080 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.61■□□□□ 0.25
Foxf1Q61080 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Foxf1Q61080 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxf1Q61080 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.6■□□□□ 0.25
Foxf1Q61080 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.6■□□□□ 0.25
Foxf1Q61080 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Foxf1Q61080 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Foxf1Q61080 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Foxf1Q61080 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Foxf1Q61080 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Foxf1Q61080 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms