Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ripk1Q60855 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.75■□□□□ 0.59
Ripk1Q60855 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.75■□□□□ 0.59
Ripk1Q60855 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.75■□□□□ 0.59
Ripk1Q60855 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.75■□□□□ 0.59
Ripk1Q60855 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ripk1Q60855 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ripk1Q60855 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ripk1Q60855 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ripk1Q60855 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ripk1Q60855 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ripk1Q60855 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.74■□□□□ 0.59
Ripk1Q60855 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ripk1Q60855 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ripk1Q60855 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ripk1Q60855 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ripk1Q60855 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.73■□□□□ 0.59
Ripk1Q60855 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ripk1Q60855 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ripk1Q60855 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ripk1Q60855 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ripk1Q60855 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.72■□□□□ 0.59
Ripk1Q60855 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ripk1Q60855 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ripk1Q60855 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ripk1Q60855 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ripk1Q60855 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ripk1Q60855 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Ripk1Q60855 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.71■□□□□ 0.59
Ripk1Q60855 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.71■□□□□ 0.59
Ripk1Q60855 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ripk1Q60855 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ripk1Q60855 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ripk1Q60855 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ripk1Q60855 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ripk1Q60855 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ripk1Q60855 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ripk1Q60855 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ripk1Q60855 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ripk1Q60855 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.69■□□□□ 0.58
Ripk1Q60855 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Golph3-202ENSMUST00000226517 2359 ntBASIC18.69■□□□□ 0.58
Ripk1Q60855 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ripk1Q60855 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ripk1Q60855 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ripk1Q60855 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.68■□□□□ 0.58
Ripk1Q60855 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.68■□□□□ 0.58
Ripk1Q60855 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Ripk1Q60855 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ripk1Q60855 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ripk1Q60855 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ripk1Q60855 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ripk1Q60855 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ripk1Q60855 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ripk1Q60855 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.67■□□□□ 0.58
Ripk1Q60855 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ripk1Q60855 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ripk1Q60855 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ripk1Q60855 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ripk1Q60855 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms