Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col12a1Q60847 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col12a1Q60847 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Col12a1Q60847 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Col12a1Q60847 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col12a1Q60847 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Col12a1Q60847 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col12a1Q60847 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col12a1Q60847 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col12a1Q60847 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col12a1Q60847 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.09■□□□□ 0.81
Col12a1Q60847 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col12a1Q60847 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col12a1Q60847 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Col12a1Q60847 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col12a1Q60847 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col12a1Q60847 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Col12a1Q60847 Trmt13-210ENSMUST00000198454 880 ntBASIC20.09■□□□□ 0.81
Col12a1Q60847 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col12a1Q60847 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.09■□□□□ 0.81
Col12a1Q60847 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.09■□□□□ 0.81
Col12a1Q60847 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col12a1Q60847 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col12a1Q60847 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.08■□□□□ 0.81
Col12a1Q60847 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Col12a1Q60847 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col12a1Q60847 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.08■□□□□ 0.8
Col12a1Q60847 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col12a1Q60847 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col12a1Q60847 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col12a1Q60847 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Col12a1Q60847 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col12a1Q60847 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Col12a1Q60847 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Col12a1Q60847 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col12a1Q60847 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.07■□□□□ 0.8
Col12a1Q60847 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col12a1Q60847 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col12a1Q60847 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Col12a1Q60847 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.06■□□□□ 0.8
Col12a1Q60847 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Col12a1Q60847 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col12a1Q60847 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col12a1Q60847 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col12a1Q60847 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col12a1Q60847 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col12a1Q60847 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.05■□□□□ 0.8
Col12a1Q60847 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Col12a1Q60847 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col12a1Q60847 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.05■□□□□ 0.8
Col12a1Q60847 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col12a1Q60847 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Col12a1Q60847 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col12a1Q60847 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col12a1Q60847 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col12a1Q60847 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col12a1Q60847 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col12a1Q60847 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col12a1Q60847 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.03■□□□□ 0.8
Col12a1Q60847 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.03■□□□□ 0.8
Col12a1Q60847 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.03■□□□□ 0.8
Col12a1Q60847 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col12a1Q60847 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
Col12a1Q60847 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.03■□□□□ 0.8
Col12a1Q60847 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col12a1Q60847 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col12a1Q60847 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col12a1Q60847 Gm715-201ENSMUST00000117865 831 ntBASIC20.02■□□□□ 0.8
Col12a1Q60847 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.02■□□□□ 0.8
Col12a1Q60847 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms