Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn11Q60771 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Cldn11Q60771 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn11Q60771 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cldn11Q60771 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn11Q60771 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn11Q60771 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cldn11Q60771 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn11Q60771 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn11Q60771 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Cldn11Q60771 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.68■□□□□ 0.9
Cldn11Q60771 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cldn11Q60771 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.68■□□□□ 0.9
Cldn11Q60771 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn11Q60771 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.68■□□□□ 0.9
Cldn11Q60771 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn11Q60771 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Cldn11Q60771 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Cldn11Q60771 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn11Q60771 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn11Q60771 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.67■□□□□ 0.9
Cldn11Q60771 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn11Q60771 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cldn11Q60771 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cldn11Q60771 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Cldn11Q60771 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn11Q60771 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.65■□□□□ 0.9
Cldn11Q60771 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn11Q60771 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn11Q60771 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn11Q60771 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cldn11Q60771 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn11Q60771 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn11Q60771 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn11Q60771 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Cldn11Q60771 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn11Q60771 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.64■□□□□ 0.89
Cldn11Q60771 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn11Q60771 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn11Q60771 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.64■□□□□ 0.89
Cldn11Q60771 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn11Q60771 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn11Q60771 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn11Q60771 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.63■□□□□ 0.89
Cldn11Q60771 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cldn11Q60771 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn11Q60771 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn11Q60771 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn11Q60771 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn11Q60771 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cldn11Q60771 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn11Q60771 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.62■□□□□ 0.89
Cldn11Q60771 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn11Q60771 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cldn11Q60771 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn11Q60771 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.62■□□□□ 0.89
Cldn11Q60771 Gm43060-201ENSMUST00000200621 289 ntBASIC20.62■□□□□ 0.89
Cldn11Q60771 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn11Q60771 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cldn11Q60771 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn11Q60771 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn11Q60771 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.61■□□□□ 0.89
Cldn11Q60771 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn11Q60771 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn11Q60771 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.61■□□□□ 0.89
Cldn11Q60771 Gm40848-201ENSMUST00000221998 324 ntBASIC20.61■□□□□ 0.89
Cldn11Q60771 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cldn11Q60771 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cldn11Q60771 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn11Q60771 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cldn11Q60771 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms