Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-2Q5R1I4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-2Q5R1I4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 AV356131-201ENSMUST00000206201 750 ntBASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-2Q5R1I4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.56■□□□□ 0.4
Trav6-2Q5R1I4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Gm9988-201ENSMUST00000069786 435 ntBASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-2Q5R1I4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Gm37179-201ENSMUST00000194862 823 ntBASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Gm10033-202ENSMUST00000211874 928 ntBASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-2Q5R1I4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-2Q5R1I4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-2Q5R1I4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-2Q5R1I4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-2Q5R1I4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-2Q5R1I4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav6-2Q5R1I4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-2Q5R1I4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms