Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7d-3Q5R1I1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav7d-3Q5R1I1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7d-3Q5R1I1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav7d-3Q5R1I1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Gm7143-201ENSMUST00000222811 859 ntBASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav7d-3Q5R1I1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav7d-3Q5R1I1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav7d-3Q5R1I1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav7d-3Q5R1I1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms