Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6d-4Q5R1I0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6d-4Q5R1I0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trav6d-4Q5R1I0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6d-4Q5R1I0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6d-4Q5R1I0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.74■□□□□ 0.27
Trav6d-4Q5R1I0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-4Q5R1I0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.72■□□□□ 0.27
Trav6d-4Q5R1I0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-4Q5R1I0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Gm26833-201ENSMUST00000180899 440 ntBASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-4Q5R1I0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 911.7 ms