Protein–RNA interactions for Protein: Q3USQ7

Syndig1l, Synapse differentiation-inducing gene protein 1-like, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syndig1lQ3USQ7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Syndig1lQ3USQ7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syndig1lQ3USQ7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Gm43566-201ENSMUST00000196851 808 ntBASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syndig1lQ3USQ7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syndig1lQ3USQ7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syndig1lQ3USQ7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syndig1lQ3USQ7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syndig1lQ3USQ7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syndig1lQ3USQ7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syndig1lQ3USQ7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syndig1lQ3USQ7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syndig1lQ3USQ7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.68■□□□□ 0.58
Syndig1lQ3USQ7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syndig1lQ3USQ7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syndig1lQ3USQ7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syndig1lQ3USQ7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms