Protein–RNA interactions for Protein: Q3UM18

Lsg1, Large subunit GTPase 1 homolog, mousemouse

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1Q3UM18 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsg1Q3UM18 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsg1Q3UM18 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Rps24-207ENSMUST00000224568 714 ntBASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lsg1Q3UM18 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lsg1Q3UM18 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsg1Q3UM18 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lsg1Q3UM18 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Lsg1Q3UM18 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lsg1Q3UM18 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.13■□□□□ 0.65
Lsg1Q3UM18 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.13■□□□□ 0.65
Lsg1Q3UM18 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.13■□□□□ 0.65
Lsg1Q3UM18 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsg1Q3UM18 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lsg1Q3UM18 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lsg1Q3UM18 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lsg1Q3UM18 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Lsg1Q3UM18 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lsg1Q3UM18 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lsg1Q3UM18 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.08■□□□□ 0.65
Lsg1Q3UM18 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lsg1Q3UM18 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms