Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc61Q3UJV1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc61Q3UJV1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc61Q3UJV1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc61Q3UJV1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc61Q3UJV1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc61Q3UJV1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.71■□□□□ 0.91
Ccdc61Q3UJV1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc61Q3UJV1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc61Q3UJV1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc61Q3UJV1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc61Q3UJV1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc61Q3UJV1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc61Q3UJV1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc61Q3UJV1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc61Q3UJV1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc61Q3UJV1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc61Q3UJV1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc61Q3UJV1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc61Q3UJV1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc61Q3UJV1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms