Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.04■□□□□ 0.32
Smn1P97801 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smn1P97801 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.04■□□□□ 0.32
Smn1P97801 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smn1P97801 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.04■□□□□ 0.32
Smn1P97801 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smn1P97801 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smn1P97801 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.04■□□□□ 0.32
Smn1P97801 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smn1P97801 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Smn1P97801 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smn1P97801 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.03■□□□□ 0.32
Smn1P97801 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.03■□□□□ 0.32
Smn1P97801 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smn1P97801 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Smn1P97801 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.03■□□□□ 0.32
Smn1P97801 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smn1P97801 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smn1P97801 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smn1P97801 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smn1P97801 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smn1P97801 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smn1P97801 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smn1P97801 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smn1P97801 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smn1P97801 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Smn1P97801 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smn1P97801 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smn1P97801 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.02■□□□□ 0.31
Smn1P97801 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smn1P97801 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smn1P97801 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smn1P97801 Mir6538-201ENSMUST00000183713 110 ntBASIC17.01■□□□□ 0.31
Smn1P97801 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.01■□□□□ 0.31
Smn1P97801 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Smn1P97801 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.01■□□□□ 0.31
Smn1P97801 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smn1P97801 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smn1P97801 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Smn1P97801 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smn1P97801 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smn1P97801 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smn1P97801 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.01■□□□□ 0.31
Smn1P97801 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Smn1P97801 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17■□□□□ 0.31
Smn1P97801 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smn1P97801 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17■□□□□ 0.31
Smn1P97801 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smn1P97801 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smn1P97801 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.98■□□□□ 0.31
Smn1P97801 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.98■□□□□ 0.31
Smn1P97801 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Smn1P97801 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.98■□□□□ 0.31
Smn1P97801 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smn1P97801 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smn1P97801 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.97■□□□□ 0.31
Smn1P97801 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smn1P97801 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smn1P97801 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Smn1P97801 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smn1P97801 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smn1P97801 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smn1P97801 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.96■□□□□ 0.31
Smn1P97801 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smn1P97801 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms