Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.82■□□□□ 0.6
Smad5P97454 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.82■□□□□ 0.6
Smad5P97454 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smad5P97454 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Smad5P97454 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Smad5P97454 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Smad5P97454 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Smad5P97454 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.81■□□□□ 0.6
Smad5P97454 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.81■□□□□ 0.6
Smad5P97454 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.81■□□□□ 0.6
Smad5P97454 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smad5P97454 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smad5P97454 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.8■□□□□ 0.6
Smad5P97454 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.8■□□□□ 0.6
Smad5P97454 Gm43017-201ENSMUST00000198296 752 ntBASIC18.8■□□□□ 0.6
Smad5P97454 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Smad5P97454 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smad5P97454 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smad5P97454 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smad5P97454 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smad5P97454 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smad5P97454 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Gm8493-201ENSMUST00000196881 489 ntBASIC18.79■□□□□ 0.6
Smad5P97454 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.79■□□□□ 0.6
Smad5P97454 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.79■□□□□ 0.6
Smad5P97454 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.79■□□□□ 0.6
Smad5P97454 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smad5P97454 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad5P97454 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.78■□□□□ 0.6
Smad5P97454 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.78■□□□□ 0.6
Smad5P97454 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smad5P97454 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smad5P97454 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.78■□□□□ 0.6
Smad5P97454 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smad5P97454 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Smad5P97454 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smad5P97454 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.77■□□□□ 0.6
Smad5P97454 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smad5P97454 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smad5P97454 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smad5P97454 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smad5P97454 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Smad5P97454 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smad5P97454 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smad5P97454 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad5P97454 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smad5P97454 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smad5P97454 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad5P97454 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smad5P97454 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smad5P97454 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smad5P97454 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smad5P97454 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smad5P97454 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms