Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.61■□□□□ 0.89
Vps45P97390 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.61■□□□□ 0.89
Vps45P97390 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps45P97390 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps45P97390 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps45P97390 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Vps45P97390 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Vps45P97390 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps45P97390 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.6■□□□□ 0.89
Vps45P97390 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Vps45P97390 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.6■□□□□ 0.89
Vps45P97390 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps45P97390 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Vps45P97390 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Gm43137-201ENSMUST00000198052 594 ntBASIC20.59■□□□□ 0.89
Vps45P97390 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps45P97390 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Vps45P97390 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps45P97390 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vps45P97390 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps45P97390 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Vps45P97390 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps45P97390 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps45P97390 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps45P97390 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vps45P97390 Mir7075-201ENSMUST00000184187 82 ntBASIC20.57■□□□□ 0.88
Vps45P97390 Gm43017-201ENSMUST00000198296 752 ntBASIC20.57■□□□□ 0.88
Vps45P97390 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Vps45P97390 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps45P97390 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vps45P97390 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vps45P97390 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps45P97390 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps45P97390 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps45P97390 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps45P97390 Gm5874-201ENSMUST00000096101 508 ntBASIC20.55■□□□□ 0.88
Vps45P97390 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps45P97390 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
Vps45P97390 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps45P97390 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps45P97390 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps45P97390 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Vps45P97390 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.54■□□□□ 0.88
Vps45P97390 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Vps45P97390 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Vps45P97390 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps45P97390 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps45P97390 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vps45P97390 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps45P97390 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps45P97390 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps45P97390 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps45P97390 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps45P97390 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps45P97390 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps45P97390 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps45P97390 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps45P97390 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.53■□□□□ 0.88
Vps45P97390 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps45P97390 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps45P97390 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps45P97390 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps45P97390 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps45P97390 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps45P97390 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps45P97390 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps45P97390 Notumos-201ENSMUST00000151998 2659 ntBASIC20.51■□□□□ 0.87
Vps45P97390 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms