Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SgcdP82347 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
SgcdP82347 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.32■□□□□ 0.52
SgcdP82347 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SgcdP82347 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.32■□□□□ 0.52
SgcdP82347 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcdP82347 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
SgcdP82347 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcdP82347 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SgcdP82347 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcdP82347 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.31■□□□□ 0.52
SgcdP82347 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcdP82347 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
SgcdP82347 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcdP82347 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcdP82347 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SgcdP82347 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SgcdP82347 Golph3-205ENSMUST00000228671 2842 ntBASIC18.3■□□□□ 0.52
SgcdP82347 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Etf1-202ENSMUST00000180351 108 ntBASIC18.29■□□□□ 0.52
SgcdP82347 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.29■□□□□ 0.52
SgcdP82347 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SgcdP82347 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SgcdP82347 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.28■□□□□ 0.52
SgcdP82347 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.28■□□□□ 0.52
SgcdP82347 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.28■□□□□ 0.52
SgcdP82347 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
SgcdP82347 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SgcdP82347 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SgcdP82347 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.27■□□□□ 0.52
SgcdP82347 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SgcdP82347 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.52
SgcdP82347 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SgcdP82347 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SgcdP82347 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SgcdP82347 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SgcdP82347 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcdP82347 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcdP82347 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcdP82347 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SgcdP82347 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.26■□□□□ 0.51
SgcdP82347 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SgcdP82347 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcdP82347 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SgcdP82347 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.25■□□□□ 0.51
SgcdP82347 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.25■□□□□ 0.51
SgcdP82347 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.25■□□□□ 0.51
SgcdP82347 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SgcdP82347 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SgcdP82347 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcdP82347 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcdP82347 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcdP82347 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.24■□□□□ 0.51
SgcdP82347 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.24■□□□□ 0.51
SgcdP82347 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.24■□□□□ 0.51
SgcdP82347 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SgcdP82347 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcdP82347 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SgcdP82347 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.24■□□□□ 0.51
SgcdP82347 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SgcdP82347 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SgcdP82347 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcdP82347 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms