Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nup43P59235 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nup43P59235 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup43P59235 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup43P59235 Gm12821-201ENSMUST00000120022 600 ntBASIC18.82■□□□□ 0.6
Nup43P59235 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
Nup43P59235 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup43P59235 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup43P59235 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.82■□□□□ 0.6
Nup43P59235 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.82■□□□□ 0.6
Nup43P59235 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
Nup43P59235 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup43P59235 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.82■□□□□ 0.6
Nup43P59235 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.82■□□□□ 0.6
Nup43P59235 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup43P59235 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup43P59235 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup43P59235 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.81■□□□□ 0.6
Nup43P59235 Gm43137-201ENSMUST00000198052 594 ntBASIC18.81■□□□□ 0.6
Nup43P59235 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup43P59235 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup43P59235 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nup43P59235 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup43P59235 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nup43P59235 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.8■□□□□ 0.6
Nup43P59235 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.8■□□□□ 0.6
Nup43P59235 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nup43P59235 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup43P59235 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup43P59235 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup43P59235 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nup43P59235 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nup43P59235 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.79■□□□□ 0.6
Nup43P59235 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.78■□□□□ 0.6
Nup43P59235 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup43P59235 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Nup43P59235 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Nup43P59235 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup43P59235 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Nup43P59235 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nup43P59235 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nup43P59235 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nup43P59235 Gm27454-201ENSMUST00000185090 204 ntBASIC18.77■□□□□ 0.6
Nup43P59235 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nup43P59235 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nup43P59235 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.77■□□□□ 0.6
Nup43P59235 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nup43P59235 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup43P59235 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup43P59235 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup43P59235 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.76■□□□□ 0.59
Nup43P59235 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup43P59235 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nup43P59235 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup43P59235 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup43P59235 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.75■□□□□ 0.59
Nup43P59235 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup43P59235 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nup43P59235 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nup43P59235 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.75■□□□□ 0.59
Nup43P59235 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nup43P59235 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.75■□□□□ 0.59
Nup43P59235 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nup43P59235 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup43P59235 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup43P59235 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.75■□□□□ 0.59
Nup43P59235 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nup43P59235 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup43P59235 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.74■□□□□ 0.59
Nup43P59235 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.74■□□□□ 0.59
Nup43P59235 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup43P59235 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nup43P59235 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup43P59235 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup43P59235 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup43P59235 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup43P59235 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms