Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.36■■□□□ 1.17
Hmgcs2P54869 Gm13234-201ENSMUST00000120010 747 ntBASIC22.36■■□□□ 1.17
Hmgcs2P54869 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hmgcs2P54869 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hmgcs2P54869 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.36■■□□□ 1.17
Hmgcs2P54869 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hmgcs2P54869 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hmgcs2P54869 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hmgcs2P54869 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hmgcs2P54869 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Hmgcs2P54869 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Gm10602-201ENSMUST00000098239 609 ntBASIC22.34■■□□□ 1.17
Hmgcs2P54869 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hmgcs2P54869 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hmgcs2P54869 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hmgcs2P54869 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Hmgcs2P54869 Gm27801-201ENSMUST00000184174 223 ntBASIC22.33■■□□□ 1.17
Hmgcs2P54869 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hmgcs2P54869 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Hmgcs2P54869 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hmgcs2P54869 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hmgcs2P54869 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Hmgcs2P54869 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hmgcs2P54869 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcs2P54869 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcs2P54869 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcs2P54869 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcs2P54869 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.31■■□□□ 1.16
Hmgcs2P54869 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcs2P54869 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Hmgcs2P54869 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Hmgcs2P54869 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcs2P54869 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.3■■□□□ 1.16
Hmgcs2P54869 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.3■■□□□ 1.16
Hmgcs2P54869 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcs2P54869 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcs2P54869 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcs2P54869 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcs2P54869 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcs2P54869 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.28■■□□□ 1.16
Hmgcs2P54869 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcs2P54869 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.28■■□□□ 1.16
Hmgcs2P54869 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Hmgcs2P54869 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcs2P54869 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcs2P54869 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcs2P54869 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcs2P54869 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcs2P54869 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Hmgcs2P54869 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcs2P54869 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcs2P54869 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcs2P54869 Gm12933-201ENSMUST00000120203 872 ntBASIC22.26■■□□□ 1.15
Hmgcs2P54869 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.26■■□□□ 1.15
Hmgcs2P54869 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcs2P54869 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcs2P54869 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcs2P54869 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms